Comprehensive analysis of microRNA profiles in multiple sclerosis including next-generation sequencing.

Authors:
Andreas Keller, Petra Leidinger, Florian Steinmeyer, Cord Stähler, Andre Franke, Georg Hemmrich-Stanisak, Andreas Kappel, Ian Wright, Jan Dörr, Friedemann Paul, Ricarda Diem, Beatrice Tocariu-Krick, Benjamin Meder, Christina Backes, Eckart Meese, Klemens Ruprecht
Year of publication:
2013
Volume:
-
Issue:
-
Issn:
1352-4585
Journal title abbreviated:
MULT SCLER
Journal title long:
Multiple sclerosis : clinical and laboratory research
Impact factor:
4.863
Abstract: 
This study identifies a set of miRNAs deregulated in CIS/RRMS and reconfirms the previously reported underexpression of hsa-miR-20a-5p in MS. hsa-miR-20a-5p and the other validated miRNAs may represent promising candidates for future evaluation as biomarkers for MS and could be of relevance in the pathophysiology of this disease.In patients with CIS/RRMS, NGS and microarray analysis identified 38 and eight significantly deregulated miRNAs, respectively. Three of these miRNAs were found to be significantly up- (hsa-miR-16-2-3p) or downregulated (hsa-miR-20a-5p, hsa-miR-7-1-3p) by both methods. Another five of the miRNAs significantly deregulated in the NGS screen showed the same direction of regulation in the microarray analysis. qRT-PCR confirmed the direction of regulation for all eight and was significant for three miRNAs.miRNA expression was analyzed in whole blood samples from treatment-naïve patients with CIS (n = 25) or RRMS (n = 25) and 50 healthy controls by NGS, microarray analysis, and quantitative real-time polymerase chain reaction (qRT-PCR).The objective of this study was to perform a comprehensive analysis of miRNA expression profiles in blood of patients with a clinically isolated syndrome (CIS) or relapsing-remitting multiple sclerosis (RRMS) including next-generation sequencing (NGS).MicroRNAs (miRNAs) are short, noncoding RNAs with gene regulatory functions whose expression profiles may serve as disease biomarkers.