@POPSTART 100000 @AVG_KIDS 2.50 @REPRO_POP_PERCENTAGE 80 @POPULATIONS 1 @HETEROPOP 2 @SUBPOP 0 100 @GENERATIONS 10 @RANDOM_SEED 85789 @POP_RANDOM 2996451 @CHECKPOINTNUMBER 20 @CHECKPOINT 0 0 F 0 @CHECKPOINT 1 0 t 0 @CHECKPOINT 2 30 F 0 @CHECKPOINT 3 30 t 0 @LOCUSNUMBER 6 @LOCNAME 0 Testlokus1 @LOCNAME 1 Testlokus2 @LOCNAME 2 Testlokus3 @LOCNAME 3 Testlokus4 @LOCNAME 4 Testlokus5 @LOCNAME 5 Testlokus6 @LOCALLEL_FREQ 0 0 0.30 @LOCALLEL_FREQ 0 1 0.10 @LOCALLEL_FREQ 0 2 0.10 @LOCALLEL_FREQ 0 3 0.30 @LOCALLEL_FREQ 0 4 0.10 @LOCALLEL_FREQ 0 5 0.10 @LOCTHETA 0 0 0.03 @LOCTHETA 1 0 0.03 @LOCTHETA 2 0 0.03 @LOCTHETA 3 0 0.03 @LOCTHETA 4 0 0.03 @LOCTHETA 5 0 0.03 @LOCASSOALLEL 0 0 0 @LOCASSOALLEL 1 0 0 @LOCASSOALLEL 2 0 0 @LOCASSOALLEL 3 0 0 @LOCFOUNDER_PERC 0 0.0 @DISEASE_MODEL S @LOC_PENETRANCE 0 10 2 0 @LOC_PENETRANCE 1 10 2 0 @LOC_PENETRANCE 2 10 2 0 @LOC_PENETRANCE 3 5 1 0 @LOC_PENETRANCE 4 5 1 0 @LOC_PENETRANCE 5 5 1 0 @DISEASE_ENVIRON 0.030 @COLLECT_FAMILIES p @N_AFF 2 @SAMPLE_SIZE 10 @DISEASE_CUTOFF 31 @IO_PROGRESS F @IO_LOG F @IO_CP_OVERVIEW F @IO_CP_OVERVIEWEXEL F @IO_CP_DRAW S @IO_CP_DRAWEXEL F @IO_CP_HORIZ S @IO_CP_LINK F Read datafile..OK POPSIM: Checking population settings... INFO: expected endsize: 100000.000000 DONE POPULATION: 0 individiual: 0 GENER: 1, POPUL: 100893, MATED: 80000, (0.80%) kids: 2.52 per mating GENER: 2, POPUL: 102532, MATED: 80714, (0.80%) kids: 2.54 per mating GENER: 3, POPUL: 103867, MATED: 82026, (0.80%) kids: 2.53 per mating GENER: 4, POPUL: 104261, MATED: 83094, (0.80%) kids: 2.51 per mating GENER: 5, POPUL: 105225, MATED: 83408, (0.80%) kids: 2.52 per mating GENER: 6, POPUL: 105736, MATED: 84180, (0.80%) kids: 2.51 per mating GENER: 7, POPUL: 106568, MATED: 84588, (0.80%) kids: 2.52 per mating GENER: 8, POPUL: 107420, MATED: 85254, (0.80%) kids: 2.52 per mating GENER: 9, POPUL: 108452, MATED: 85936, (0.80%) kids: 2.52 per mating GENER: 10, POPUL: 109187, MATED: 86762, (0.80%) kids: 2.52 per mating