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Institut für Klinische Molekularbiologie der Christian-Albrechts-Universität zu Kiel

Scientist

Lars Wienbrandt

Research Group

Genetics & Bioinformatics

Contact

+49 (0) 431 / 500 - 15 196

l.wienbrandt [at] ikmb.uni-kiel.de

Research Interest

Lars Wienbrandt

Main Publications

SNPInt-GPU: Tool for epistasis testing with multiple methods and GPU acceleration
PubMed (PMID: 0) | 2021 | Unknown Journal
Genomewide Association Study of Severe Covid-19 with Respiratory Failure.
PubMed (PMID: 32558485) | 2020 | New England journal of medicine
Network Aggregation to Enhance Results Derived from Multiple Analytics
PubMed (PMID: 0) | 2020 | Unknown Journal
Reference-Based Haplotype Phasing with FPGAs
PubMed (PMID: 0) | 2020 | Unknown Journal
1,000x Faster than PLINK: Combined FPGA and GPU Accelerators for Logistic Regression-based Detection of Epistasis
PubMed (PMID: 0) | 2019 | Journal of Computational Science

Comparison of Markov Chain Monte Carlo Software for the Evolutionary Analysis of Y-Chromosomal Microsatellite Data.
PubMed (PMID: 31452861) | 2019 | Computational and structural biotechnology journal
Protein-coding variants contribute to the risk of atopic dermatitis and skin-specific gene expression.
PubMed (PMID: 31707051) | 2019 | Journal of allergy and clinical immunology
1,000x Faster Than PLINK: Genome-Wide Epistasis Detection with Logistic Regression Using Combined FPGA and GPU Accelerators
PubMed (PMID: 10) | 2018 | Lecture Notes in Computer Science
Fast Genome-Wide Third-order SNP Interaction Tests with Information Gain on a Low-cost Heterogeneous Parallel FPGA-GPU Computing Architecture
PubMed (PMID: 10) | 2017 | Procedia Computer Science
Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS
PubMed (PMID: 0) | 2016 | Unknown Journal
Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS
PubMed (PMID: 0) | 2016 | International Conference on Application-specific Systems, Architectures and Processors
Genome-wide Association Interaction Studies with MB-MDR and maxT Multiple Testing Correction on FPGAs
PubMed (PMID: 0) | 2016 | Procedia Computer Science
High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs
PubMed (PMID: 0) | 2015 | Unknown Journal
Parallelizing Epistasis Detection in GWAS on FPGA and GPU-Accelerated Computing Systems.
PubMed (PMID: 26451813) | 2015 | IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM
Vy-PER: eliminating false positive detection of virus integration events in next generation sequencing data.
PubMed (PMID: 26166306) | 2015 | Scientific Reports
FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS
PubMed (PMID: 0) | 2014 | Procedia Computer Science
FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS
PubMed (PMID: 10) | 2014 | Procedia Computer Science
UPC++ for bioinformatics: A case study using genome-wide association studies
PubMed (PMID: 0) | 2014 | IEEE International Conference on Cluster Computing

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